基于深度学习的视网膜病变分割方法通常需要大量精确的像素注释数据。但是，概述病变区域的圆形或椭圆等粗糙注释的效率可能是像素级注释的六倍。因此，本文提出了一个注释细化网络，以将粗注释转换为像素级分割掩码。我们的主要新颖性是原型学习范式的应用来增强不同数据集或类型病变的概括能力。我们还引入了一个原型称量模块，以处理过度较小的病变的具有挑战性的病例。提出的方法对公开可用的IDRID数据集进行了培训，然后概括为公共DDR和我们的现实世界私人数据集。实验表明，我们的方法显着改善了初始的粗蒙版，并以较大的边缘优于非概率基线。此外，我们证明了原型称量模块在跨数据库和跨阶级设置中的实用性。

为了使婴儿脑瘫（CP）的早期医疗干预，早期诊断出脑损伤至关重要。尽管一般运动评估（GMA）在早期CP检测中显示出令人鼓舞的结果，但它很费力。大多数现有作品都以视频为输入，以对GMA自动化进行烦躁的动作（FMS）分类。这些方法需要对视频进行完整的观察，并且无法本地化包含正常FMS的视频帧。因此，我们提出了一种名为WO-GMA的新颖方法，以在弱监督的在线环境中执行FMS本地化。首先将婴儿体重点作为WO-GMA的输入提取。然后，WO-GMA执行本地时空提取，然后进行两个网络分支，以生成伪夹标签和模型在线操作。凭借剪辑级伪标签，动作建模分支学会以在线方式检测FMS。具有757个不同婴儿视频的数据集上的实验结果表明，WO-GMA可以获得最新的视频级别分类和Cliplevel检测结果。此外，仅需要前20％的视频持续时间才能获得与完全观察到的分类结果，这意味着FMS诊断时间大大缩短了。代码可在以下网址获得：https：//github.com/scofiedluo/wo-gma。

Modern deep neural networks have achieved superhuman performance in tasks from image classification to game play. Surprisingly, these various complex systems with massive amounts of parameters exhibit the same remarkable structural properties in their last-layer features and classifiers across canonical datasets. This phenomenon is known as "Neural Collapse," and it was discovered empirically by Papyan et al. \cite{Papyan20}. Recent papers have theoretically shown the global solutions to the training network problem under a simplified "unconstrained feature model" exhibiting this phenomenon. We take a step further and prove the Neural Collapse occurrence for deep linear network for the popular mean squared error (MSE) and cross entropy (CE) loss. Furthermore, we extend our research to imbalanced data for MSE loss and present the first geometric analysis for Neural Collapse under this setting.

An unbiased scene graph generation (SGG) algorithm referred to as Skew Class-balanced Re-weighting (SCR) is proposed for considering the unbiased predicate prediction caused by the long-tailed distribution. The prior works focus mainly on alleviating the deteriorating performances of the minority predicate predictions, showing drastic dropping recall scores, i.e., losing the majority predicate performances. It has not yet correctly analyzed the trade-off between majority and minority predicate performances in the limited SGG datasets. In this paper, to alleviate the issue, the Skew Class-balanced Re-weighting (SCR) loss function is considered for the unbiased SGG models. Leveraged by the skewness of biased predicate predictions, the SCR estimates the target predicate weight coefficient and then re-weights more to the biased predicates for better trading-off between the majority predicates and the minority ones. Extensive experiments conducted on the standard Visual Genome dataset and Open Image V4 \& V6 show the performances and generality of the SCR with the traditional SGG models.

In the field of cross-modal retrieval, single encoder models tend to perform better than dual encoder models, but they suffer from high latency and low throughput. In this paper, we present a dual encoder model called BagFormer that utilizes a cross modal interaction mechanism to improve recall performance without sacrificing latency and throughput. BagFormer achieves this through the use of bag-wise interactions, which allow for the transformation of text to a more appropriate granularity and the incorporation of entity knowledge into the model. Our experiments demonstrate that BagFormer is able to achieve results comparable to state-of-the-art single encoder models in cross-modal retrieval tasks, while also offering efficient training and inference with 20.72 times lower latency and 25.74 times higher throughput.

Deep learning has been widely used for protein engineering. However, it is limited by the lack of sufficient experimental data to train an accurate model for predicting the functional fitness of high-order mutants. Here, we develop SESNet, a supervised deep-learning model to predict the fitness for protein mutants by leveraging both sequence and structure information, and exploiting attention mechanism. Our model integrates local evolutionary context from homologous sequences, the global evolutionary context encoding rich semantic from the universal protein sequence space and the structure information accounting for the microenvironment around each residue in a protein. We show that SESNet outperforms state-of-the-art models for predicting the sequence-function relationship on 26 deep mutational scanning datasets. More importantly, we propose a data augmentation strategy by leveraging the data from unsupervised models to pre-train our model. After that, our model can achieve strikingly high accuracy in prediction of the fitness of protein mutants, especially for the higher order variants (> 4 mutation sites), when finetuned by using only a small number of experimental mutation data (<50). The strategy proposed is of great practical value as the required experimental effort, i.e., producing a few tens of experimental mutation data on a given protein, is generally affordable by an ordinary biochemical group and can be applied on almost any protein.

Three-dimensional (3D) ultrasound imaging technique has been applied for scoliosis assessment, but current assessment method only uses coronal projection image and cannot illustrate the 3D deformity and vertebra rotation. The vertebra detection is essential to reveal 3D spine information, but the detection task is challenging due to complex data and limited annotations. We propose VertMatch, a two-step framework to detect vertebral structures in 3D ultrasound volume by utilizing unlabeled data in semi-supervised manner. The first step is to detect the possible positions of structures on transverse slice globally, and then the local patches are cropped based on detected positions. The second step is to distinguish whether the patches contain real vertebral structures and screen the predicted positions from the first step. VertMatch develops three novel components for semi-supervised learning: for position detection in the first step, (1) anatomical prior is used to screen pseudo labels generated from confidence threshold method; (2) multi-slice consistency is used to utilize more unlabeled data by inputting multiple adjacent slices; (3) for patch identification in the second step, the categories are rebalanced in each batch to solve imbalance problem. Experimental results demonstrate that VertMatch can detect vertebra accurately in ultrasound volume and outperforms state-of-the-art methods. VertMatch is also validated in clinical application on forty ultrasound scans, and it can be a promising approach for 3D assessment of scoliosis.

Image captioning is one of the straightforward tasks that can take advantage of large-scale web-crawled data which provides rich knowledge about the visual world for a captioning model. However, since web-crawled data contains image-text pairs that are aligned at different levels, the inherent noises (e.g., misaligned pairs) make it difficult to learn a precise captioning model. While the filtering strategy can effectively remove noisy data, however, it leads to a decrease in learnable knowledge and sometimes brings about a new problem of data deficiency. To take the best of both worlds, we propose a noise-aware learning framework, which learns rich knowledge from the whole web-crawled data while being less affected by the noises. This is achieved by the proposed quality controllable model, which is learned using alignment levels of the image-text pairs as an additional control signal during training. The alignment-conditioned training allows the model to generate high-quality captions of well-aligned by simply setting the control signal to desired alignment level at inference time. Through in-depth analysis, we show that our controllable captioning model is effective in handling noise. In addition, with two tasks of zero-shot captioning and text-to-image retrieval using generated captions (i.e., self-retrieval), we also demonstrate our model can produce high-quality captions in terms of descriptiveness and distinctiveness. Code is available at \url{https://github.com/kakaobrain/noc}.

Automatic image colorization is a particularly challenging problem. Due to the high illness of the problem and multi-modal uncertainty, directly training a deep neural network usually leads to incorrect semantic colors and low color richness. Existing transformer-based methods can deliver better results but highly depend on hand-crafted dataset-level empirical distribution priors. In this work, we propose DDColor, a new end-to-end method with dual decoders, for image colorization. More specifically, we design a multi-scale image decoder and a transformer-based color decoder. The former manages to restore the spatial resolution of the image, while the latter establishes the correlation between semantic representations and color queries via cross-attention. The two decoders incorporate to learn semantic-aware color embedding by leveraging the multi-scale visual features. With the help of these two decoders, our method succeeds in producing semantically consistent and visually plausible colorization results without any additional priors. In addition, a simple but effective colorfulness loss is introduced to further improve the color richness of generated results. Our extensive experiments demonstrate that the proposed DDColor achieves significantly superior performance to existing state-of-the-art works both quantitatively and qualitatively. Codes will be made publicly available.

Obtaining ground truth data in medical imaging has difficulties due to the fact that it requires a lot of annotating time from the experts in the field. Also, when trained with supervised learning, it detects only the cases included in the labels. In real practice, we want to also open to other possibilities than the named cases while examining the medical images. As a solution, the need for anomaly detection that can detect and localize abnormalities by learning the normal characteristics using only normal images is emerging. With medical image data, we can design either 2D or 3D networks of self-supervised learning for anomaly detection task. Although 3D networks, which learns 3D structures of the human body, show good performance in 3D medical image anomaly detection, they cannot be stacked in deeper layers due to memory problems. While 2D networks have advantage in feature detection, they lack 3D context information. In this paper, we develop a method for combining the strength of the 3D network and the strength of the 2D network through joint embedding. We also propose the pretask of self-supervised learning to make it possible for the networks to learn efficiently. Through the experiments, we show that the proposed method achieves better performance in both classification and segmentation tasks compared to the SoTA method.